Output Catalog
ASAP is committed to accelerating the pace of discovery and informing a path to a cure for Parkinson’s disease through collaboration, research-enabling resources, and data sharing. We’ve created this catalog to showcase the research outputs and tools developed by ASAP-funded programs.
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Output Type
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Program
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CRN Team Name
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Theme
fMRI tasks to explore emotion-motor interactions
Code for fMRI tasks designed to explore emotion-motor interactions—Active Escape and Approach-Avoidance tasks in the Socal Kinesia and Incentivization for Parkinson's Disease (SKIP) dataset.
Incentivized Vigor Task
Code for an fMRI task in which human participants use a joystick to make speeded reaches to cued targets. This task examines incentive effects on movement, part of the Socal Kinesia and Incentivization for Parkinson's Disease (SKIP) dataset.
Evaluation of a novel method for spectral analysis of neurophysiology data
This code implements a novel method for correcting a distortion effect that is present in the power spectra of neuronal spike trains.
3D printed MR-compatible stereotaxic frame for NHPs
A compact MRI-compatible stereotaxis suitable for a variety of NHP species (Macaca mulatta, Macaca fascicularis, and Cebus apella) that allows multimodal alignment through technique-specific fiducial markers.
Task data for plotting interspike intervals (ISI) and spikes from fast-scan cyclic voltammetric (FSCV) electrochemical and electrophysiological recordings
Data includes interspike intervals (ISI) and spikes from fast-scan cyclic voltammetric (FSCV) electrochemical (EChem) and electrophysiological (EPhys) recordings for plotting.
Plotting interspike intervals (ISI) and spikes from fast-scan cyclic voltammetric (FSCV) electrochemical and electrophysiological recordings
Code for plotting interspike intervals (ISI) and spikes from fast-scan cyclic voltammetric (FSCV) electrochemical (EChem) and electrophysiological (EPhys) recordings.
Code for simulating FSCV artifacts
Code for simulating FSCV artifacts for algorithm validation in Amjad et al. 2024 10.1523/ENEURO.0001-24.2024
Code for extracting FSCV spikes
Code for extracting FSCV spikes used in Amjad et al. 2024 10.1523/ENEURO.0001-24.2024.
Automated spike sorter utilizing the super paramagnetic clustering algorithm.
TomSort is an automated spike sorter utilizing the superparamagnetic clustering (SPC) algorithm.
SoCal Kinesia and Incentivization for Parkinson’s Disase (SKIP)
SKIP is a repository merging task-based and resting-state fMRI datasets for research on human movement and incentivization, focusing on Parkinson's Disease.
Outlier waveform detection for internal globus pallidus (GPi) activity
Matlab code identifies single units with spike waveforms that take on outlier feature values in the internal segment of the globus pallidus (GPi) units recorded from two nonhuman primates (in healthy and parkinsonian states).
Code for: Dissociation of putative open loop circuit from ventral putamen to motor cortical areas in humans I: high-resolution connectomics
Code for pre-processing fMRI data and region on interest masks associated with Rixor et al. 2024. https://www.biorxiv.org/content/10.1101/2024.08.28.610129v1
