Output Catalog
ASAP is committed to accelerating the pace of discovery and informing a path to a cure for Parkinson’s disease through collaboration, research-enabling resources, and data sharing. We’ve created this catalog to showcase the research outputs and tools developed by ASAP-funded programs.
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Output Type
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Program
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CRN Team Name
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Theme
Mouse reaching task
The repository includes materials for building and analyzing data from a mouse-reaching task: a bill of materials, 3D models, schematics, an Arduino controller, video recording scripts, and data analysis scripts using DLC.
twichma/Sequence-and-pattern-detection: Sequence and pattern detection code
The code provided is for analyzing sequences and patterns.
Matlab code: Determination of precisely timed sequences of calcium events
The file "Identify_sequences.m' used to identify sequences of calcium imaging events.
MonkeyLogic files for behavioral task
Folder includes timing (*.m) and parameter (*.txt) files for MonkeyLogic, used in single-target and two-target touchscreen tasks as described in a publication.
R code for Jaccard index analysis
Code to conduct Jaccard index analysis
Matlab code: Event-based analysis of calcium transients
Matlab algorithms to align raw calcium traces to behavioral events during a behavioral task.
suny-downstate-medical-center/pd_m1_6ohda: M1_Control_6OHDA
Liqiang Chu et al found decreased excitability in these neurons in a Parkinson's mouse model. A simulation using NetPyNE was created to study the impact of the changed PT5B neuron on motor cortex spiking dynamics.
