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Output Catalog

ASAP is committed to accelerating the pace of discovery and informing a path to a cure for Parkinson’s disease through collaboration, research-enabling resources, and data sharing. We’ve created this catalog to showcase the research outputs and tools developed by ASAP-funded programs.

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Regulation of mitophagy by the NSL complex underlies genetic risk for Parkinson’s disease: Bioinformatic Prioritisation and Hit Validation

This protocol describes the Bioinformatic Prioritization of PD GWAS candidates for High Content Screening, and Hit Validation by allele-specific expression (ASE) analysis.

Program: Collaborative Research Network
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SoRA microscopy protocol for imaging oligomers in human brain tissue

This protocol gives a step-by-step guide to imaging oligomers in human brain tissue using a spinning disk confocal microscope.

Program: Collaborative Research Network
Team:
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Live-cell imaging; mitochondrial reactive oxygen species

This protocol presents instructions for assessing mitochondrial souced reactive oxygen species using MitoTracker® Red CM-H2XRos dye.

Program: Collaborative Research Network
Team:
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Single-molecule Immunofluorescence Tissue Staining Protocol for Oligomer Imaging V.3

This protocol details background fluorescence quenching and immunofluorescence staining of human brain tissue for oligomer imaging.

Program: Collaborative Research Network
Team:
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Free-floating Mouse Brain Immunohistochemistry

This protocol enables immunohistochemical staining of murine tissue with superior penetration of the tissue by the reagents due to the free-floating approach.

Program: Collaborative Research Network
Team:
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High-Throughput Multiplex Live-Cell Imaging of iPSC-derived neurons

High-throughput imaging of live iPSC-derived neurons using multiplexed dyes shows dynamic organelle movements in nucleus, mitochondria, and lysosomes.

Program: Collaborative Research Network
Team:
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Single-Molecule Antibody Slides For Fluorescence Microscopy

This protocol describes how to create single-molecule antibody slides for fluorescence microscopy.

Program: Collaborative Research Network
Team:
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Tetraspeck Bead Imaging V.2

Protocol for imaging tetraspeck beads on glass coverslips.

Program: Collaborative Research Network
Team:
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ASO transfection of iPSC-derived cells

A protocol for transfecting iPSC-derived midbrain dopaminergic neurons with antisense oligonucleotides (ASOs).

Program: Collaborative Research Network
Team:
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Aggregation of human recombinant alpha-synuclein

This protocol describes a method of generating aggregation of human recombinant alpha-synuclein.

Program: Collaborative Research Network
Team:
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Single-cell RNA-seq

Harvesting and performing single-cell RNA-seq.

Program: Collaborative Research Network
Team:
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Electrophysiology with iPSC-derived neurons

This protocol describes the method to perform patch-clamp recordings of iPSC-derived neurons.

Program: Collaborative Research Network
Team:
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Bulk tissue RNA-sequencing – hiPSC-derived astrocytes, neurons and co-cultures

Bulk tissue RNA-sequencing of hiPSC-derived astrocytes, neurons and co-cultures using the Illumina TruSeq Stranded mRNA Library Prep kit

Program: Collaborative Research Network
Team:
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MSD V-PLEX Proinflammatory panel

The V-PLEX panel offers analytically validated multiplex assay kits. Developed under rigorous design control, V-PLEX kits provide accurate and reproducible results with consistency from lot to lot.

Program: Collaborative Research Network
Team:
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TEM: Transmission electron microscopy

TEM protocol.

Program: Collaborative Research Network
Team:
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