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Output Catalog

ASAP is committed to accelerating the pace of discovery and informing a path to a cure for Parkinson’s disease through collaboration, research-enabling resources, and data sharing. We’ve created this catalog to showcase the research outputs and tools developed by ASAP-funded programs.

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Whole mount dissection and staining of enteric nervous system

This protocol details whole mount dissection and staining of the enteric nervous system.

Program: Collaborative Research Network
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Regional Mouse Brain Analysis (Modified QUINT)

This is series of protocols that has been adapted from published and unpublished protocols broadly referred to as the QUINT workflow: QuPath visualization/segmentation QuickNII Brain Atlas Registration QMask Hemispheric Separation Visualign…

Program: Collaborative Research Network
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Embryonic/Postnatal Mouse Neuron Culture Protocol

This protocol details the primary neuron culture procedures from embryonic and postnatal mice.

Program: Collaborative Research Network
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Hematoxylin and Eosin Stain – FOR PARAFFIN-EMBEDDED TISSUE SECTIONS

Protocol for Hematoxylin and Eosin Stain on paraffin-embedded tissue sections is described.

Program: Collaborative Research Network
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Human Brain Sequential Extraction (Tau)

Human brain sequential detergent fractionation for PHF tau extraction

Program: Collaborative Research Network
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Direct ELISA

The protocol explains how to perform a direct ELISA on a specific protein of interest, outlining the setup and running procedures.

Program: Collaborative Research Network
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α-Synuclein Protein Preparation (Large scale)

Protocol for large-scale preparation of recombinant α-synuclein protein.

Program: Collaborative Research Network
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Stereotaxic Injections- Mouse

This protocol details mouse stereotaxic injections for any purpose, but in this case is primarily used for the injection of misfolded proteins.

Program: Collaborative Research Network
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Stereotaxic injections into mouse brain and ex-vivo electrophysiology

Protocol outlines injection of α-Synuclin PFF and monomer into mouse brain, followed by preparation of acute slices from mice for whole-cell patch clamp recordings.

Program: Collaborative Research Network
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Immunocytochemistry (Henderson Lab)

Protocol for immunocytochemistry on mammalian cells in 24 and 96 well plates.

Program: Collaborative Research Network
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Three antibody staining protocol for immunolabeling of mouse brain sections

The protocol addresses factors affecting imaging of tissue sections: autofluorescence and consistency in antibody preparation for ideal results.

Program: Collaborative Research Network
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Synaptic analysis workflow using SEQUIN

Protocol for analyzing synaptic loci in neuroscience experiments using Zeiss Airyscan microscope. Includes identification, quantification, and localization of synaptic loci and nearby labels on neurites of the super-resolution images acquired

Program: Collaborative Research Network
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Culturing Primary Hippocampal Neurons from Embryonic Rat Brain

Protocol for culturing hippocampal primary neurons from embryonic rats is described.

Program: Collaborative Research Network
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Aligning Science Across Parkinson's
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