Pipeline and MATLAB code for micro-CT-based fiber localization

Output Details

Pipeline and MATLAB code for micro-CT-based method for precise fiber localization and atlas alignment after performing micro-fiber photometry in behaving mice. The new micro-fiber array approach is capable of chronically measuring and optogenetically manipulating local dynamics across over 100 targeted locations simultaneously in head-fixed and freely moving mice, enabling investigation of cell-type and neurotransmitter-specific signals over arbitrary 3-D volumes.
Tags
  • Behavior/Behavioral studies
  • Fiber photometry
  • Imaging
  • In Vivo
  • Mouse
  • Optogenetics

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