A human development-based protocol for the differentiation of human ESCs into midbrain dopaminergic neurons
By Julia Julia Leonard onProtocol for the differentiation of human embryonic stem cells into midbrain dopaminergic neurons. This protocol recapitulates the activation of developmental pathways known to be important for mDA neuron development and mimics key sequences of events taking place in human midbrain development.
Neuronal dysfunction and gene modulation by non-coding RNA in Parkinson’s disease and synucleinopathies
By Julia Julia Leonard onEmerging evidence suggests that non-coding RNAs (ncRNAs) contribute to molecular events underlying progressive neuronal degeneration. This review discusses recent literature focused on the role of RNA-based mechanisms involved in different aspects of neuronal pathology in Parkinson’s disease and synucleinopathy models.
Purification of recombinant low-density lipoprotein receptor-related protein associated protein 1 (LRPAP1, RAP) from Escherichia coli
By Emma Sherrell onThis protocol details how to efficiently purify low-density lipoprotein (LDL) receptor-related protein associated protein 1 (LRPAP1 or RAP) from Escherichia coli.
Generation of the iPSC line FINi002-A from a male Parkinson’s disease patient carrying compound heterozygous mutations in the PRKN gene
By Julia Julia Leonard onThis article describes the generation of the iPSC line FINi002-A from a male Parkinson's disease patient carrying compound heterozygous mutations in the PRKN gene.
Alpha-synuclein overexpression can drive microbiome dysbiosis in mice
By Emma Sherrell onGrowing evidence indicates that persons living with Parkinson's disease (PD) have a unique composition of indigenous gut microbes. Here, the authors used a transgenic mouse strain, which overexpress wild-type human α-syn to test how the gut microbiome composition responds in this model of PD pathology during aging.
STC-1 passaging and PD associated microbe stimulation protocol
By Emma Sherrell onSTC-1 passaging and PD-associated microbe stimulation protocol.
SOP for RT (Reverse Transcription) Promega kit
By Emma Sherrell onSOP for RT (Reverse Transcription) Promega kit.
Richert/Heterogeneous_SNNs: v1.0.0: Scripts to replicate the results of Gast et al. PNAS 2024
By Julia Julia Leonard onThis release includes configuration files and scripts to replicate the main results presented in Gast et al. PNAS 2024, including Python scripts for the simulation, bifurcation analysis, and training of networks of Izhikevich neurons with heterogeneous spike thresholds.
SOP for immune cells isolation mouse adult brain with CD45 beads
By Emma Sherrell onSOP for immune cells isolation mouse adult brain with CD45 beads.
Making Carbon-Fibre Microelectrode (CFM) for electrochemical recordings of monoamines in ex vivo mouse brain slices
By Julia Julia Leonard onThis protocol is to make carbon-fiber microelectrode (CFM) for electrochemical recordings of monoamines in ex-vivo mouse brain slices. This protocol is optimized for the detection of dopamine from 300 µm coronal striatal sections, using a Miller voltammeter.
Fluorescence microscopy shadow imaging for neuroscience
By Emma Sherrell onFluorescence microscopy remains a widely applied experimental approaches in neuroscience and beyond and is continuously evolving to make it easier and more versatile. This review highlights the inherent limitations of fluorescence microscopy and conventional labeling and summarizes the pros and cons of recent shadow imaging approaches.
Generation of locus coeruleus norepinephrine neurons from human pluripotent stem cells
By Julia Julia Leonard onA dataset related to the development of human LC-NE neurons from human pluripotent stem cells.
Generation of locus coeruleus norepinephrine neurons from human pluripotent stem cells
By Julia Julia Leonard onCentral norepinephrine (NE) neurons, located mainly in the locus coeruleus (LC), are implicated in diverse psychiatric and neurodegenerative diseases and are an emerging target for drug discovery. To facilitate their study, the authors developed a method to generate 40–60% human LC-NE neurons from human pluripotent stem cells.
SOP for flow cytometry after DSS-induced gut and brain injury
By Emma Sherrell onSOP for flow cytometry after DSS-induced gut and brain injury.
pLenti HsATP13A3 D498N
By Julia Julia Leonard onPlasmid: Transfer plasmid for lenti viral vector production, expresses D498N mutant of Homo sapiens ATP13A3.