H9 ES AAVS-NGN2; FBXO7-/-
By savannah onH9 ES cells with AAVS1-NGN2 in which FBXO7 has been deleted using CRISPR.
Global proteomic analysis of WT and GRN-/- HeLa cells
By savannah onGlobal proteomic analysis of WT and GRN-/- HeLa cells. https://www.nature.com/articles/s41467-022-33500-9
Global lipidomics of WT and GRN-/- cells & mouse models, including plus and minus GRN addback
By savannah onThis dataset contains: - Global lipidomics of WT and GRN-/- HeLa cells, including plus and minus GRN addback. - Global lipidomics of WT and NPC1-/- HeLa cells. - Global lipidomics of WT and GRN-/- HeLa cells, including plus and minus GRN addback. Global lipidomics of WT and GRN mutant mouse brain tissue. https://www.nature.com/articles/s41467-022-33500-9
Gene editing of YIPF4 in hESCs V3
By savannah onThis protocol describes the creation of YIPF4 knockout cell lines in H9 hESC cells using CRISPR-Cas9. Associated with preprint: https://doi.org/10.1101/2022.12.06.519342
Cryo-ET of S. cerevisiae during starvation (tomograms)
By savannah onCryo-ET of S. cerevisiae during starvation (tomograms). Accession number: https://www.ebi.ac.uk/emdb/EMD-15526 https://www.ebi.ac.uk/emdb/EMD-15545 https://www.ebi.ac.uk/emdb/EMD-15546 https://www.ebi.ac.uk/emdb/EMD-15547 https://www.ebi.ac.uk/emdb/EMD-15549 https://www.ebi.ac.uk/emdb/EMD-15548
Code for extraction of any user-defined information from uniprot
By savannah onCode for extraction of any user-defined information from Uniprot.
Code for analysis of ER-phagy in iNeurons via proteomics
By savannah onCode for analysis of ER-phagy in iNeurons via proteomics. Associated with preprint: https://doi.org/10.1101/2023.06.26.546565
Characterizing spatial and temporal properties of ER-phagy receptors
By savannah onAssociated with preprint: https://doi.org/10.1101/2023.06.26.546565
Analysis of ER structures in Cultured Induced Neuron axons
By savannah onAssociated with preprint: https://doi.org/10.1101/2023.06.26.546565
Analysis of ER Flux in Cultured Induced Neurons using Keima ER reporters
By savannah onAssociated with preprint: https://doi.org/10.1101/2023.06.26.546565
