Software for analyzing the expression of TEs at locus-specific resolution

By Talitha Forcier, PhD
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Output Details

Description

We enable the locus-specific analysis of transposable elements, with curated GTF files to improve detection of yound transposable elements, such as HERVs and young L1s. Parts of this software will be used for single-cell TE anlaysis protocols, which are under development

Identifier (DOI)
10.5281/zenodo.4792796
Tags
  • RNA-seq
  • TE expression
Team
Team Jakobsson
Program
Collaborative Research Network
Theme
Neuro-Immune Interactions

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