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  • HEK293 TMEM115-3xHA GolgiTAG (CVCL_C8A6)

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    Cell line generated from HEK293 cells (Cat# CRL-1573, RRID:CVCL_0045) virally transfected with a construct expressing TMEM115-3xHA (GolgiTAG)

  • Role of autophagy pathway in Parkinson’s disease and related Genetic Neurological disorders

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    The authors provide a comprehensive overview of the general importance of autophagy in Parkinson’s disease (PD) and related disorders of the central nervous system (CNS).

  • Scalable, flexible carbon fiber electrode thread arrays for three-dimensional probing of neurochemical activity in deep brain structures of rodents

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    The authors' CFET array has the potential to unlock a wide range of applications, from uncovering the role of neuromodulators in synaptic plasticity, to addressing safety barriers in clinical translation toward diagnostic and adaptive treatment in PD

  • Mouse Behavior – Open Field and T-Maze

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    This protocol describes two behavioral tasks for mice. The first is the Open Field Test, which is used to asses motor behavior, and the second is the T-Maze, which is used to assess spatial learning.

  • Scientific Perspectives: Structural Biology of LRRK2 and its Interaction with Microtubules

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    Mutations in LRRK2 are linked to Parkinson's disease. LRRK2 regulates membrane trafficking and interacts with microtubules. Recent studies have revealed its cytosolic and microtubule-bound forms using cryo-EM and cryo-ET techniques.

  • Live Imaging of Primary Mouse Neuron Cultures

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    This protocol describes live imaging of primary neuron cultures. Included are methods for preparing hippocampal or dopamine neuronal cultures from neonatal mouse brain tissue. The imaging described involves labeling of dopamine neurons with a fluorescent DAT ligand and using virally encoded pHlourin sensors to measure vesicular release of neurotransmitter as the neurons are electrically stimulated. This technique was used in Jain et al., 2023 to compare vesicular release in neurons between various transgenic knockout mouse lines.

  • Sample preparation for aCGH karyotyping

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    This protocol describes the standard procedure preparing cell pellets from human pluripotent stem cells (hPSCs) cultured on MEFs for outsourced aCGH karyotyping.

  • iPSC differentiation into Macrophages

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    This protocol describes iPSC differentiation into macrophages.

  • Nuclear cytoplasmic fractionation

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    This protocol describes nuclear cytoplasmic fractionation.

  • Mitophagy experiments

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    This protocol describes how to induce mitophagy in HeLa cells.

  • Mechanisms Controlling Selective Elimination of Damaged Lysosomes

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    Lysophagy, triggered by membrane rupture, involves galectins binding to lysosomal contents to promote autophagic recycling. Damaged lysosomes are ubiquitylated, leading to autophagosome formation for degradation in healthy lysosomes.

  • pBMN_HA-TBK1 (kinase dead – D135N)

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    Plasmid: Used for the expression of TBK1 carrying a kinase dead mutation D135N (SMC Internal No. 1997).

  • pBMN_HA-TBK1 (E696K)

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    Plasmid: Used for the expression of TBK1 carrying E696K mutation (SMC Internal No. 1998).

  • Vesicular dysfunction and pathways to neurodegeneration

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    In this review, the pathways that have emerged as critical for neuronal survival in the human brain are discussed, illustrating the diversity of proteins and cellular events with three molecular case studies from different neurological diseases.

  • In Vivo Electrophysiology (Mouse)

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    This protocol describes the in vivo electrophysiology method for recording neuronal activity in mice.

  • Single cell survival assay

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    This protocol describes the experimental procedure used to measure single cell survival rates post nucleofection of human pluripotent stem cells (hPSCs). General Notes: 1. Throughout these protocols, the term hPSC is used to collectively refer to both hiPSCs and hESCs. All described procedures have been tested and work equally well for hiPSCs and hESCs.

  • Immunohistochemistry

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    This protocol describes immunohistochemical staining of fixed brain sections.

  • RNAScope in situ hybridization (ISH) multiplex fluorescent

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    Instructions to perform ISH using RNAscope kit from ACDBio company optimized for frozen mouse brain and nodose ganglia sections.

  • pCAG-MBP-ATG9 (1-830)

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    Plasmid: Expresses human ATG9 C-terminal truncation mutant in mammalian cells.

  • Culture and transfection of HEK293T cells

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    This protocol describes a standard procedure culturing and transfecting HEK293T cells Protocol overview: A. Culturing HEK293T cells B. Transfection of HEK293T cells with Lipofectamine 2000

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Aligning Science Across Parkinson's
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