Datasets associated with “Peripheral Neuronal Activation Shapes the Microbiome and Alters Gut Physiology”

By Bryan B. Yoo, Peter Thuy-Boun, Kelly Weldon, Collin Challis, Michael J. Sweredoski, Ken Y. Chan, Taren M. Thron, Gil Sharon, Annie Moradian, Gregory Humphrey, Qiyun Zhu, Justin Shaffer, Dennis W. Wolan, Pieter C. Dorrestein, Rob Knight, Viviana Gradinaru, PhD, Sarkis Mazmanian, Jessica Griffiths

View Published Dataset

Description

Metagenomics, metabolomics, proteomics, RNAseq, and immunohistochemistry datasets associated with the preprint "Peripheral Neuronal Activation Shapes the Microbiome and Alters Gut Physiology" (Griffiths, Yoo et al., 2023).

Identifier (DOI)

10.5281/zenodo.5637450

Tags

Antemortem
Cholinergic neurons
Dopaminergic neurons
Enteric nervous system
In Vivo
Metabolomics
Metagenome
Microbiome
Mouse
Proteomics
RNA Bulk

Discovery Team

Team Sulzer, Team Gradinaru

Program

Collaborative Research Network

Theme

Circuitry and Brain-Body Interactions Neuro-Immune Interactions

Meet the Authors

Bryan B. Yoo

External Collaborator
Peter Thuy-Boun

External Collaborator
Kelly Weldon

External Collaborator
Collin Challis

External Collaborator
Michael J. Sweredoski

External Collaborator
Ken Y. Chan

External Collaborator
Taren M. Thron

External Collaborator
Gil Sharon

External Collaborator
Annie Moradian

External Collaborator
Gregory Humphrey

External Collaborator
Qiyun Zhu

External Collaborator
Justin Shaffer

External Collaborator
Dennis W. Wolan

External Collaborator
Pieter C. Dorrestein

External Collaborator
Rob Knight

External Collaborator
Viviana Gradinaru, PhD

Lead PI (Core Leadership): Team Gradinaru,

California Institute of Technology
Sarkis Mazmanian

Co-PI (Core Leadership): Team Sulzer, Team Gradinaru,

California Institute of Technology
Jessica Griffiths

External Collaborator