Single cell analysis of iPSC-derived midbrain organoids

Output Details

The following script was used for analysis of gene corrected (GC) versus GBA1 mutant (MUT) midbrain organoids. The purpose was to combine, filter, integrate, and identify clusters and differentially expressed genes sets. This is part of a Collection of protocols (dx.doi.org/10.17504/protocols.io.8epv593dng1b/v1) for the paper "Glucocerebrosidase, a Parkinson´s disease-associated protein, is imported into mitochondria and regulates complex I assembly and function" (https://doi.org/10.21203/rs.3.rs-1521848/v1)

Identifier (DOI)
10.5281/zenodo.6475864
Tags
  • Midbrains
  • Organoid
  • scRNAseq (Single-cell RNA-seq)
  • Sequencing

Meet the Authors

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    Pascale Baden

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    Maria Jose Perez Jimenez, PhD

    Key Personnel: Team Schapira

    German Center for Neurodegenerative Diseases

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    Stefanie Kalb

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    Hariam Raji

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    María Illescas

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    Claudio Giuliano

  • Federico Bertoli, MD

    Key Personnel: Team Schapira

    German Center for Neurodegenerative Diseases

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    Alessandra Calogero

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    Graziella Cappelletti

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    Kathrin Brockmann

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    Thomas Gasser

  • Anthony Schapira, PhD

    Lead PI (Core Leadership): Team Schapira

    University College London

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    Cristina Ugalde

  • Michela Deleidi, MD, PhD

    Co-PI (Core Leadership): Team Schapira

    Institut Imagine