SpatialBrain.org – a platform to view integrated data from Wade-Martins Laboratory of Molecular Neurodegeneration

Output Details

An open repository to access data and results from spatial and translatome expression profiling of basal dopaminergic neurons in mice (OVX and aging). More information can be viewed in published article Kilfeather & Khoo, et al. (2023) "Single-cell spatial transcriptomic and translatomic profiling of dopaminergic neurons in health, aging, and disease" Spatial Transcriptomic Analyses: - Cell Type Markers - SN/VTA Markers in Dopaminergic Neurons - Cell Number Changes in Age TRAP Analyses: - Dopaminergic Markers - Dopaminergic Ageing - Alternative Splicing in Dopaminergic Neurons Coming soon: Integration with iPS-derived dopaminergic transcriptomic datasets.
Tags
  • Long-read sequencing
  • Mouse
  • Next generation sequencing
  • Postmortem
  • Spatial transcriptomics

Meet the Authors

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    Peter kilfeather

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    Jia Hui Khoo

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    Katherina Wagner

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    Han Liang

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    Maria Claudia Caiazza

    Key Personnel: Team Cragg

    University of Oxford

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    Yanru An

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    Xingju Zhang

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    Xiaoyan Chen

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    Natalie Connor-Robson

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    Zhouchun Shang

  • Richard Wade-Martins, PhD

    Co-PI (Core Leadership): Team Cragg

    University of Oxford